Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
MMP28Q9H239 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 HYMAI-201ENST00000635591 3347 ntBASIC15.92■□□□□ 0.14
MMP28Q9H239 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 TUBB8P6-201ENST00000436895 1288 ntBASIC15.92■□□□□ 0.14
MMP28Q9H239 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 AC004264.1-201ENST00000608354 794 ntBASIC15.92■□□□□ 0.14
MMP28Q9H239 AL023875.1-201ENST00000640777 796 ntBASIC15.92■□□□□ 0.14
MMP28Q9H239 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.92■□□□□ 0.14
MMP28Q9H239 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
MMP28Q9H239 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MMP28Q9H239 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.92■□□□□ 0.14
MMP28Q9H239 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
MMP28Q9H239 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 PCDHA14-201ENST00000506751 2298 ntBASIC15.91■□□□□ 0.14
MMP28Q9H239 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP28Q9H239 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
MMP28Q9H239 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.91■□□□□ 0.14
MMP28Q9H239 KRT18P16-201ENST00000510337 1294 ntBASIC15.91■□□□□ 0.14
MMP28Q9H239 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.91■□□□□ 0.14
MMP28Q9H239 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
MMP28Q9H239 RN7SL471P-201ENST00000580476 299 ntBASIC15.91■□□□□ 0.14
MMP28Q9H239 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.91■□□□□ 0.14
MMP28Q9H239 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC15.91■□□□□ 0.14
MMP28Q9H239 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MMP28Q9H239 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP28Q9H239 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP28Q9H239 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
MMP28Q9H239 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
MMP28Q9H239 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MMP28Q9H239 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MMP28Q9H239 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.9■□□□□ 0.14
MMP28Q9H239 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms