Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 AL136038.3-201ENST00000561909 1096 ntBASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 AL445228.2-201ENST00000605589 952 ntBASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 AC116407.2-201ENST00000613639 860 ntBASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.13■□□□□ 0.81
CCSER1Q9C0I3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 AL645929.1-201ENST00000420084 975 ntBASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 MTCL1P1-201ENST00000446207 792 ntBASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 KRT18P35-201ENST00000510488 1269 ntBASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CCSER1Q9C0I3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 AL031133.1-201ENST00000406807 723 ntBASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 DDX43P3-201ENST00000441064 443 ntBASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 AC009949.1-201ENST00000623048 1830 ntBASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCSER1Q9C0I3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CCSER1Q9C0I3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms