Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 AC073508.3-201ENST00000619697 1419 ntBASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
HERPUD2Q9BSE4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HERPUD2Q9BSE4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 KRT18P57-201ENST00000443599 1254 ntBASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC009053.2-201ENST00000563701 2365 ntBASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HERPUD2Q9BSE4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AC009949.1-201ENST00000623048 1830 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 LINC00304-203ENST00000565008 1864 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AP000523.1-201ENST00000398242 1049 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AL512604.3-201ENST00000569583 964 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 AC010331.1-201ENST00000611423 582 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 KRT8P47-201ENST00000604727 1398 ntBASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HERPUD2Q9BSE4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 SPDYE15P-201ENST00000424157 909 ntBASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 AL441883.1-201ENST00000566170 1045 ntBASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HERPUD2Q9BSE4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms