Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CPPED1Q9BRF8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 C2orf69P3-201ENST00000565542 1120 ntBASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 HLA-J-201ENST00000462773 1622 ntBASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CPPED1Q9BRF8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 INGX-201ENST00000359239 846 ntBASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 MIR1238-201ENST00000408483 83 ntBASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 TSPY7P-201ENST00000431358 1114 ntBASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 AC024243.1-201ENST00000609234 778 ntBASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.9■□□□□ 0.3
CPPED1Q9BRF8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms