Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 AC103564.2-201ENST00000432853 1299 ntBASIC20.51■□□□□ 0.87
PTPN18Q99952 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN18Q99952 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PTPN18Q99952 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN18Q99952 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.51■□□□□ 0.87
PTPN18Q99952 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.51■□□□□ 0.87
PTPN18Q99952 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTPN18Q99952 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 SIRPAP1-201ENST00000448467 1770 ntBASIC20.5■□□□□ 0.87
PTPN18Q99952 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN18Q99952 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 AC244107.1-201ENST00000442033 332 ntBASIC20.5■□□□□ 0.87
PTPN18Q99952 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.5■□□□□ 0.87
PTPN18Q99952 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN18Q99952 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPN18Q99952 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.5■□□□□ 0.87
PTPN18Q99952 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 AC010507.1-201ENST00000633895 436 ntBASIC20.5■□□□□ 0.87
PTPN18Q99952 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPN18Q99952 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTPN18Q99952 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PTPN18Q99952 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTPN18Q99952 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PTPN18Q99952 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PTPN18Q99952 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC20.5■□□□□ 0.87
PTPN18Q99952 AL353593.2-201ENST00000602529 1483 ntBASIC20.5■□□□□ 0.87
PTPN18Q99952 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 COX5BP2-201ENST00000392354 334 ntBASIC20.49■□□□□ 0.87
PTPN18Q99952 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 KRT19P2-202ENST00000557173 1012 ntBASIC20.49■□□□□ 0.87
PTPN18Q99952 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.49■□□□□ 0.87
PTPN18Q99952 AC093512.1-201ENST00000617969 520 ntBASIC20.49■□□□□ 0.87
PTPN18Q99952 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.49■□□□□ 0.87
PTPN18Q99952 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTPN18Q99952 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTPN18Q99952 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.49■□□□□ 0.87
PTPN18Q99952 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTPN18Q99952 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms