Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC23.77■■□□□ 1.4
ABCA3Q99758 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ABCA3Q99758 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.77■■□□□ 1.4
ABCA3Q99758 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
ABCA3Q99758 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 CYB561-216ENST00000582297 897 ntTSL 3 BASIC23.76■■□□□ 1.39
ABCA3Q99758 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.76■■□□□ 1.39
ABCA3Q99758 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC23.76■■□□□ 1.39
ABCA3Q99758 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC23.76■■□□□ 1.39
ABCA3Q99758 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
ABCA3Q99758 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.76■■□□□ 1.39
ABCA3Q99758 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ABCA3Q99758 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ABCA3Q99758 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ABCA3Q99758 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ABCA3Q99758 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ABCA3Q99758 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.75■■□□□ 1.39
ABCA3Q99758 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.75■■□□□ 1.39
ABCA3Q99758 AC099522.2-201ENST00000607001 744 ntBASIC23.75■■□□□ 1.39
ABCA3Q99758 AC092919.2-201ENST00000623631 1645 ntBASIC23.75■■□□□ 1.39
ABCA3Q99758 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC23.74■■□□□ 1.39
ABCA3Q99758 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 AC006116.8-202ENST00000587620 1550 ntBASIC23.74■■□□□ 1.39
ABCA3Q99758 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 MIR661-201ENST00000384842 89 ntBASIC23.74■■□□□ 1.39
ABCA3Q99758 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 PON3-205ENST00000451904 1053 ntTSL 3 BASIC23.74■■□□□ 1.39
ABCA3Q99758 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 AC096734.2-201ENST00000562054 433 ntBASIC23.74■■□□□ 1.39
ABCA3Q99758 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC23.74■■□□□ 1.39
ABCA3Q99758 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
ABCA3Q99758 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 GMCL1P1-201ENST00000463439 1581 ntBASIC23.74■■□□□ 1.39
ABCA3Q99758 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.74■■□□□ 1.39
ABCA3Q99758 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC23.74■■□□□ 1.39
ABCA3Q99758 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.74■■□□□ 1.39
ABCA3Q99758 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
ABCA3Q99758 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 PMS2P4-201ENST00000412466 1052 ntBASIC23.73■■□□□ 1.39
ABCA3Q99758 AL627223.1-201ENST00000416693 442 ntBASIC23.73■■□□□ 1.39
ABCA3Q99758 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC23.73■■□□□ 1.39
ABCA3Q99758 GSAP-205ENST00000430584 600 ntTSL 5 BASIC23.73■■□□□ 1.39
ABCA3Q99758 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC23.73■■□□□ 1.39
ABCA3Q99758 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 AC093214.1-201ENST00000511688 1107 ntBASIC23.73■■□□□ 1.39
ABCA3Q99758 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC23.73■■□□□ 1.39
ABCA3Q99758 AC093520.2-201ENST00000561830 333 ntBASIC23.73■■□□□ 1.39
ABCA3Q99758 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC23.73■■□□□ 1.39
ABCA3Q99758 AL035252.4-201ENST00000624174 288 ntBASIC23.73■■□□□ 1.39
ABCA3Q99758 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ABCA3Q99758 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ABCA3Q99758 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 MED16-214ENST00000617672 554 ntTSL 5 BASIC23.73■■□□□ 1.39
ABCA3Q99758 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.73■■□□□ 1.39
ABCA3Q99758 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ABCA3Q99758 AL049757.1-201ENST00000616842 1596 ntBASIC23.72■■□□□ 1.39
ABCA3Q99758 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
ABCA3Q99758 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC23.72■■□□□ 1.39
ABCA3Q99758 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.72■■□□□ 1.39
ABCA3Q99758 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ABCA3Q99758 BAD-202ENST00000394531 631 ntTSL 3 BASIC23.72■■□□□ 1.39
ABCA3Q99758 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms