Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NR1H4Q96RI1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 RARRES2P4-201ENST00000514074 484 ntBASIC16.96■□□□□ 0.31
NR1H4Q96RI1 DUX4L16-201ENST00000555130 1264 ntBASIC16.96■□□□□ 0.31
NR1H4Q96RI1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NR1H4Q96RI1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.96■□□□□ 0.3
NR1H4Q96RI1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NR1H4Q96RI1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
NR1H4Q96RI1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.3
NR1H4Q96RI1 AC068338.2-201ENST00000563278 1430 ntBASIC16.96■□□□□ 0.3
NR1H4Q96RI1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
NR1H4Q96RI1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 KRT8P32-201ENST00000512863 1461 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 CNN2P6-201ENST00000439038 900 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 TSPY23P-201ENST00000440136 739 ntBASIC16.94■□□□□ 0.3
NR1H4Q96RI1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.94■□□□□ 0.3
NR1H4Q96RI1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms