Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 AC009154.2-201ENST00000621177 724 ntBASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSPG4P5Q96PW8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 AL049597.2-201ENST00000565575 961 ntBASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 Z83836.1-201ENST00000624605 1642 ntBASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.56■□□□□ 0.56
CSPG4P5Q96PW8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 AL645929.1-201ENST00000420084 975 ntBASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSPG4P5Q96PW8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 KRT8P47-201ENST00000604727 1398 ntBASIC18.54■□□□□ 0.56
CSPG4P5Q96PW8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CSPG4P5Q96PW8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms