Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 BNIP3P18-201ENST00000593976 575 ntBASIC17.51■□□□□ 0.39
LINC00615Q96LM1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC00615Q96LM1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 MINOS1P3-201ENST00000457048 203 ntBASIC17.5■□□□□ 0.39
LINC00615Q96LM1 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 AC011467.2-201ENST00000598425 242 ntBASIC17.5■□□□□ 0.39
LINC00615Q96LM1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC00615Q96LM1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC00615Q96LM1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.48■□□□□ 0.39
LINC00615Q96LM1 CLEC4GP1-201ENST00000596555 870 ntBASIC17.48■□□□□ 0.39
LINC00615Q96LM1 AC099336.1-202ENST00000602961 463 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms