Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC58Q96CX6 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 TNRC18P3-201ENST00000441896 2691 ntBASIC17.13■□□□□ 0.33
LRRC58Q96CX6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AC132938.6-201ENST00000623828 1655 ntBASIC17.13■□□□□ 0.33
LRRC58Q96CX6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
LRRC58Q96CX6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 PKD1P1-201ENST00000458669 6805 ntBASIC17.12■□□□□ 0.33
LRRC58Q96CX6 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC58Q96CX6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 MIR3180-4-201ENST00000582223 153 ntBASIC17.11■□□□□ 0.33
LRRC58Q96CX6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC58Q96CX6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms