Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC010507.1-201ENST00000633895 436 ntBASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM43Q96BQ3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 FAM58CP-201ENST00000435741 640 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 BCAR1-209ENST00000546196 1340 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AC007952.6-201ENST00000573168 2673 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AC003957.1-201ENST00000625108 2673 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 AC148477.5-201ENST00000625164 1645 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM43Q96BQ3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 AC005498.2-205ENST00000593218 784 ntBASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM43Q96BQ3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AC005082.1-201ENST00000413042 2259 ntBASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AC103564.2-201ENST00000432853 1299 ntBASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AC096734.2-201ENST00000562054 433 ntBASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AC093484.2-201ENST00000580996 2166 ntBASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 NCF1C-201ENST00000438382 1427 ntBASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM43Q96BQ3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM43Q96BQ3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM43Q96BQ3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRIM43Q96BQ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms