Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 ACTG1P14-201ENST00000446382 1122 ntBASIC17.88■□□□□ 0.45
CLDN23Q96B33 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLDN23Q96B33 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN23Q96B33 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 TSEN15P1-201ENST00000423257 515 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AP000344.2-201ENST00000512987 629 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AC096734.2-201ENST00000562054 433 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 AL096865.1-201ENST00000606796 927 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AC010654.1-201ENST00000615722 808 ntBASIC17.87■□□□□ 0.45
CLDN23Q96B33 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN23Q96B33 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 COX20P2-201ENST00000452636 358 ntBASIC17.86■□□□□ 0.45
CLDN23Q96B33 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 AC093028.1-201ENST00000622998 982 ntBASIC17.86■□□□□ 0.45
CLDN23Q96B33 AC004877.2-201ENST00000623941 599 ntBASIC17.86■□□□□ 0.45
CLDN23Q96B33 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLDN23Q96B33 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.86■□□□□ 0.45
CLDN23Q96B33 AC007952.6-201ENST00000573168 2673 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC003957.1-201ENST00000625108 2673 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 PCDHAC2-203ENST00000615316 3011 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AL139400.1-201ENST00000366220 510 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CLDN23Q96B33 GMCL1P1-201ENST00000463439 1581 ntBASIC17.85■□□□□ 0.45
CLDN23Q96B33 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.85■□□□□ 0.45
CLDN23Q96B33 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms