Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPS1Q92902 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS1Q92902 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.5■□□□□ 0.23
HPS1Q92902 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.5■□□□□ 0.23
HPS1Q92902 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
HPS1Q92902 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
HPS1Q92902 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HPS1Q92902 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.5■□□□□ 0.23
HPS1Q92902 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HPS1Q92902 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HPS1Q92902 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 AC092850.2-201ENST00000623821 2697 ntBASIC16.49■□□□□ 0.23
HPS1Q92902 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.49■□□□□ 0.23
HPS1Q92902 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.49■□□□□ 0.23
HPS1Q92902 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.49■□□□□ 0.23
HPS1Q92902 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.49■□□□□ 0.23
HPS1Q92902 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
HPS1Q92902 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.49■□□□□ 0.23
HPS1Q92902 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.49■□□□□ 0.23
HPS1Q92902 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HPS1Q92902 HYMAI-201ENST00000635591 3347 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HPS1Q92902 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.48■□□□□ 0.23
HPS1Q92902 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HPS1Q92902 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 KRT8P8-201ENST00000434750 1448 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 PCDHB19P-201ENST00000570871 2371 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 UNC93B2-201ENST00000285383 730 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS1Q92902 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS1Q92902 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS1Q92902 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.48■□□□□ 0.23
HPS1Q92902 AC010331.1-201ENST00000611423 582 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.48■□□□□ 0.23
HPS1Q92902 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.48■□□□□ 0.23
HPS1Q92902 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 ANO7L1-203ENST00000602586 1720 ntBASIC16.48■□□□□ 0.23
HPS1Q92902 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HPS1Q92902 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.47■□□□□ 0.23
HPS1Q92902 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.47■□□□□ 0.23
HPS1Q92902 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HPS1Q92902 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms