Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC073648.2-201ENST00000510116 352 ntBASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 AC021087.4-201ENST00000563761 564 ntBASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH3RF3Q8TEJ3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 SCARNA2-201ENST00000458748 420 ntBASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 SLC25A1P1-201ENST00000528351 927 ntBASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 FAM215A-202ENST00000632077 792 ntBASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH3RF3Q8TEJ3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AL671883.3-201ENST00000603274 991 ntBASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AP000867.4-201ENST00000641616 219 ntBASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AC022898.2-201ENST00000616822 1312 ntBASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH3RF3Q8TEJ3 AL356309.3-201ENST00000624132 1934 ntBASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 AC100803.2-201ENST00000562459 1963 ntBASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SH3RF3Q8TEJ3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3RF3Q8TEJ3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC21.27■□□□□ 0.99
SH3RF3Q8TEJ3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
SH3RF3Q8TEJ3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3RF3Q8TEJ3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SH3RF3Q8TEJ3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
SH3RF3Q8TEJ3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms