Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AC064862.7-201ENST00000604520 867 ntBASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SH3RF2Q8TEC5 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 INTS4P1-201ENST00000438455 1935 ntBASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 AC011467.2-201ENST00000598425 242 ntBASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
SH3RF2Q8TEC5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SH3RF2Q8TEC5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 AC132938.6-201ENST00000623828 1655 ntBASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 AL773604.1-201ENST00000617417 272 ntBASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 AL355877.3-201ENST00000622820 899 ntBASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.61■□□□□ 0.57
SH3RF2Q8TEC5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms