Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.62■□□□□ 0.41
CPSF7Q8N684 LINC00602-201ENST00000629776 2065 ntBASIC17.62■□□□□ 0.41
CPSF7Q8N684 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.62■□□□□ 0.41
CPSF7Q8N684 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CPSF7Q8N684 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 INGX-201ENST00000359239 846 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AL023284.2-201ENST00000405850 579 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC010203.1-204ENST00000548782 407 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AL445228.2-201ENST00000605589 952 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC073508.3-201ENST00000619697 1419 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC084018.2-201ENST00000613093 2607 ntBASIC17.61■□□□□ 0.41
CPSF7Q8N684 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CPSF7Q8N684 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
CPSF7Q8N684 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.6■□□□□ 0.41
CPSF7Q8N684 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 AC128688.1-201ENST00000487626 519 ntBASIC17.6■□□□□ 0.41
CPSF7Q8N684 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 AC096733.2-201ENST00000609937 1394 ntBASIC17.6■□□□□ 0.41
CPSF7Q8N684 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 AC022211.2-201ENST00000585075 2527 ntBASIC17.6■□□□□ 0.41
CPSF7Q8N684 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CPSF7Q8N684 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPSF7Q8N684 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 AL163051.1-201ENST00000569214 1512 ntBASIC17.59■□□□□ 0.41
CPSF7Q8N684 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 LIN28AP1-201ENST00000429574 405 ntBASIC17.59■□□□□ 0.41
CPSF7Q8N684 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CPSF7Q8N684 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPSF7Q8N684 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms