Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 MRPL3P1-201ENST00000400109 1033 ntBASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 AC007967.3-201ENST00000434308 558 ntBASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC60Q8IWA6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 AC010460.3-201ENST00000511359 1579 ntBASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 AC100803.2-201ENST00000562459 1963 ntBASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 AC097374.2-201ENST00000618617 1306 ntBASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CCDC60Q8IWA6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC096633.1-201ENST00000422446 749 ntBASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC106795.1-205ENST00000512851 1056 ntBASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC008608.2-201ENST00000606089 416 ntBASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 AC022898.2-201ENST00000616822 1312 ntBASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC60Q8IWA6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC60Q8IWA6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms