Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 AL121894.2-201ENST00000602977 491 ntBASIC16.89■□□□□ 0.29
CCDC71Q8IV32 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 AC084018.2-201ENST00000613093 2607 ntBASIC16.89■□□□□ 0.29
CCDC71Q8IV32 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC71Q8IV32 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.88■□□□□ 0.29
CCDC71Q8IV32 AC112907.2-201ENST00000448639 330 ntBASIC16.88■□□□□ 0.29
CCDC71Q8IV32 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 VENTXP5-201ENST00000523979 775 ntBASIC16.88■□□□□ 0.29
CCDC71Q8IV32 GCSHP2-201ENST00000560971 527 ntBASIC16.88■□□□□ 0.29
CCDC71Q8IV32 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC71Q8IV32 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 AC141586.5-201ENST00000624546 2050 ntBASIC16.87■□□□□ 0.29
CCDC71Q8IV32 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 AP000523.1-201ENST00000398242 1049 ntBASIC16.87■□□□□ 0.29
CCDC71Q8IV32 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 KRT18P48-201ENST00000434763 852 ntBASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 KRT126P-201ENST00000549467 1181 ntBASIC16.87■□□□□ 0.29
CCDC71Q8IV32 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 KRT8P3-201ENST00000519669 1449 ntBASIC16.87■□□□□ 0.29
CCDC71Q8IV32 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC71Q8IV32 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC71Q8IV32 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms