Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.05■□□□□ 0.16
LRRC28Q86X40 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRRC28Q86X40 AC006116.8-202ENST00000587620 1550 ntBASIC16.04■□□□□ 0.16
LRRC28Q86X40 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 KRT18P22-201ENST00000402024 1347 ntBASIC16.04■□□□□ 0.16
LRRC28Q86X40 TSPY14P-201ENST00000303979 915 ntBASIC16.04■□□□□ 0.16
LRRC28Q86X40 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 EGLN1P1-201ENST00000531623 762 ntBASIC16.04■□□□□ 0.16
LRRC28Q86X40 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 AL121761.2-201ENST00000598007 1648 ntBASIC16.04■□□□□ 0.16
LRRC28Q86X40 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LRRC28Q86X40 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRRC28Q86X40 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 AL357033.4-201ENST00000617703 1807 ntBASIC16.03■□□□□ 0.16
LRRC28Q86X40 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 AP001094.4-201ENST00000579008 2176 ntBASIC16.03■□□□□ 0.16
LRRC28Q86X40 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 CKBP1-201ENST00000565489 1086 ntBASIC16.03■□□□□ 0.16
LRRC28Q86X40 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRRC28Q86X40 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRRC28Q86X40 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRRC28Q86X40 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.02■□□□□ 0.16
LRRC28Q86X40 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms