Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 AC124067.4-201ENST00000519691 2379 ntBASIC16.3■□□□□ 0.2
SHFQ7M4L6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.3■□□□□ 0.2
SHFQ7M4L6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SHFQ7M4L6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ABHD17AP1-201ENST00000358206 933 ntBASIC16.29■□□□□ 0.2
SHFQ7M4L6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 RPS2P55-201ENST00000397318 883 ntBASIC16.29■□□□□ 0.2
SHFQ7M4L6 AC107956.1-201ENST00000494359 873 ntBASIC16.29■□□□□ 0.2
SHFQ7M4L6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SHFQ7M4L6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
SHFQ7M4L6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SHFQ7M4L6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 CRYGFP-201ENST00000418459 633 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL355355.2-201ENST00000442321 338 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 TSPY20P-201ENST00000450910 630 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL355312.1-201ENST00000407115 2176 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AL163051.1-201ENST00000569214 1512 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 TNRC18P3-201ENST00000441896 2691 ntBASIC16.28■□□□□ 0.2
SHFQ7M4L6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
SHFQ7M4L6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SHFQ7M4L6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SHFQ7M4L6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms