Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 BID-214ENST00000617586 542 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 AL121906.2-201ENST00000621597 723 ntBASIC13.63□□□□□ -0.23
MRPL54Q6P161 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PCDHA1-201ENST00000378133 2726 ntBASIC13.63□□□□□ -0.23
MRPL54Q6P161 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
MRPL54Q6P161 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
MRPL54Q6P161 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 AC079328.2-201ENST00000561241 3354 ntBASIC13.62□□□□□ -0.23
MRPL54Q6P161 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.62□□□□□ -0.23
MRPL54Q6P161 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
MRPL54Q6P161 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.61□□□□□ -0.23
MRPL54Q6P161 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.61□□□□□ -0.23
MRPL54Q6P161 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 AC008406.3-201ENST00000620001 1374 ntBASIC13.61□□□□□ -0.23
MRPL54Q6P161 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
MRPL54Q6P161 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.61□□□□□ -0.23
MRPL54Q6P161 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
MRPL54Q6P161 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
MRPL54Q6P161 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms