Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 NAPSB-206ENST00000562112 1266 ntBASIC16.8■□□□□ 0.28
REEP3Q6NUK4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 NEK4P2-201ENST00000580004 1012 ntBASIC16.8■□□□□ 0.28
REEP3Q6NUK4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 TMEM191A-211ENST00000637163 1067 ntBASIC16.8■□□□□ 0.28
REEP3Q6NUK4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 AC139713.2-201ENST00000641328 2723 ntBASIC16.8■□□□□ 0.28
REEP3Q6NUK4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
REEP3Q6NUK4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 MIR3917-201ENST00000580971 93 ntBASIC16.79■□□□□ 0.28
REEP3Q6NUK4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 AC010947.1-201ENST00000623454 693 ntBASIC16.79■□□□□ 0.28
REEP3Q6NUK4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.79■□□□□ 0.28
REEP3Q6NUK4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 HMGA1P5-201ENST00000412453 271 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 MIR4497-201ENST00000583208 89 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 PP12613-201ENST00000424958 2230 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AC100803.2-201ENST00000562459 1963 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 AL355312.1-201ENST00000407115 2176 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 KRT8P9-201ENST00000558927 1449 ntBASIC16.78■□□□□ 0.28
REEP3Q6NUK4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
REEP3Q6NUK4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms