Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 SDHAP2-201ENST00000455183 2001 ntBASIC16.25■□□□□ 0.19
RTL6Q6ICC9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 AKR1C7P-201ENST00000305623 895 ntBASIC16.25■□□□□ 0.19
RTL6Q6ICC9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 AC026471.1-201ENST00000564629 3026 ntBASIC16.25■□□□□ 0.19
RTL6Q6ICC9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 MYLKP1-201ENST00000509077 1580 ntBASIC16.25■□□□□ 0.19
RTL6Q6ICC9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 AC009113.1-201ENST00000570267 2443 ntBASIC16.25■□□□□ 0.19
RTL6Q6ICC9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTL6Q6ICC9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 AC113404.2-201ENST00000507884 177 ntBASIC16.24■□□□□ 0.19
RTL6Q6ICC9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.24■□□□□ 0.19
RTL6Q6ICC9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTL6Q6ICC9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 AL499627.1-201ENST00000569373 2188 ntBASIC16.23■□□□□ 0.19
RTL6Q6ICC9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.23■□□□□ 0.19
RTL6Q6ICC9 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 NUS1P2-201ENST00000417358 873 ntBASIC16.23■□□□□ 0.19
RTL6Q6ICC9 AP000347.1-202ENST00000435868 847 ntBASIC16.23■□□□□ 0.19
RTL6Q6ICC9 AP002469.2-201ENST00000531724 424 ntBASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTL6Q6ICC9 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms