Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 FAM197Y1-201ENST00000421178 764 ntBASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
LCN1P1Q5VSP4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 AC108860.2-201ENST00000562760 2183 ntBASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 CD177P1-201ENST00000606252 935 ntBASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LCN1P1Q5VSP4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 KRT8P7-201ENST00000533003 1432 ntBASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 SDHAP2-201ENST00000455183 2001 ntBASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 AC093010.1-201ENST00000473625 1624 ntBASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 AC036111.1-201ENST00000533973 1582 ntBASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCN1P1Q5VSP4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCN1P1Q5VSP4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms