Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 AC011495.1-201ENST00000498085 584 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 AC027369.6-201ENST00000525520 931 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 LINC01225-203ENST00000563550 1244 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 U62317.3-201ENST00000608319 855 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 MIR6080-201ENST00000617359 66 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 GGTLC5P-201ENST00000617623 998 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 AL163051.1-201ENST00000569214 1512 ntBASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL13A1Q5TAT6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 SNX29P1-201ENST00000548357 1007 ntBASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 AC006538.1-201ENST00000567905 1585 ntBASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
COL13A1Q5TAT6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 AL020989.1-201ENST00000422979 469 ntBASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 MPRIPP1-201ENST00000452433 1089 ntBASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 RN7SL589P-201ENST00000481268 310 ntBASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COL13A1Q5TAT6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 FXNP2-201ENST00000411625 547 ntBASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 GNAS-203ENST00000306120 1878 ntBASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
COL13A1Q5TAT6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
COL13A1Q5TAT6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
COL13A1Q5TAT6 LINC00602-201ENST00000629776 2065 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms