Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 CLEC4GP1-201ENST00000596555 870 ntBASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 AL138831.2-201ENST00000606564 490 ntBASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 AC125634.1-201ENST00000438758 1403 ntBASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC178Q5BJE1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC178Q5BJE1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 AC091607.1-201ENST00000490318 1060 ntBASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 PRELID1P1-202ENST00000567272 903 ntBASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 AC005336.2-201ENST00000593183 939 ntBASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC178Q5BJE1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 TBC1D3P5-201ENST00000579401 1545 ntBASIC21■□□□□ 0.95
CCDC178Q5BJE1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 AC096633.1-201ENST00000422446 749 ntBASIC21■□□□□ 0.95
CCDC178Q5BJE1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 AL121772.3-201ENST00000610840 674 ntBASIC21■□□□□ 0.95
CCDC178Q5BJE1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CCDC178Q5BJE1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC178Q5BJE1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 AC099336.1-202ENST00000602961 463 ntBASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC178Q5BJE1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms