Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 AC010460.3-201ENST00000511359 1579 ntBASIC21■□□□□ 0.95
CERKLQ49MI3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21■□□□□ 0.95
CERKLQ49MI3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21■□□□□ 0.95
CERKLQ49MI3 AC018445.3-201ENST00000624177 1945 ntBASIC21■□□□□ 0.95
CERKLQ49MI3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21■□□□□ 0.95
CERKLQ49MI3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CERKLQ49MI3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 RPS2P28-201ENST00000314255 741 ntBASIC20.99■□□□□ 0.95
CERKLQ49MI3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 SLC25A1P1-201ENST00000528351 927 ntBASIC20.99■□□□□ 0.95
CERKLQ49MI3 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 AC139887.3-201ENST00000568585 713 ntBASIC20.99■□□□□ 0.95
CERKLQ49MI3 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 AL671883.3-201ENST00000603274 991 ntBASIC20.99■□□□□ 0.95
CERKLQ49MI3 AP000867.4-201ENST00000641616 219 ntBASIC20.99■□□□□ 0.95
CERKLQ49MI3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CERKLQ49MI3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CERKLQ49MI3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 AC098818.2-201ENST00000564925 2320 ntBASIC20.98■□□□□ 0.95
CERKLQ49MI3 AL096828.2-201ENST00000567259 1965 ntBASIC20.98■□□□□ 0.95
CERKLQ49MI3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.98■□□□□ 0.95
CERKLQ49MI3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CERKLQ49MI3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CERKLQ49MI3 BX323043.1-201ENST00000641006 1765 ntBASIC20.97■□□□□ 0.95
CERKLQ49MI3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 RPS2P1-201ENST00000434010 821 ntBASIC20.97■□□□□ 0.95
CERKLQ49MI3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CERKLQ49MI3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.97■□□□□ 0.95
CERKLQ49MI3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CERKLQ49MI3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.96■□□□□ 0.95
CERKLQ49MI3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms