Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CFHR3Q02985 AC104819.1-201ENST00000504587 486 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.05□□□□□ -0.16
CFHR3Q02985 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 AC074051.2-201ENST00000565115 352 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CFHR3Q02985 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.05□□□□□ -0.16
CFHR3Q02985 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.05□□□□□ -0.16
CFHR3Q02985 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.05□□□□□ -0.16
CFHR3Q02985 RNF165-205ENST00000588679 2904 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CFHR3Q02985 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CFHR3Q02985 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CFHR3Q02985 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.05□□□□□ -0.16
CFHR3Q02985 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.05□□□□□ -0.16
CFHR3Q02985 NSUN5P1-202ENST00000421140 1535 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 NSUN5P2-203ENST00000457352 1529 ntBASIC14.05□□□□□ -0.16
CFHR3Q02985 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CFHR3Q02985 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CFHR3Q02985 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CFHR3Q02985 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.04□□□□□ -0.16
CFHR3Q02985 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.04□□□□□ -0.16
CFHR3Q02985 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 AL020996.1-203ENST00000536896 2307 ntBASIC14.04□□□□□ -0.16
CFHR3Q02985 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CFHR3Q02985 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CFHR3Q02985 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CFHR3Q02985 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CFHR3Q02985 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.03□□□□□ -0.16
CFHR3Q02985 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.03□□□□□ -0.16
CFHR3Q02985 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 AL138831.2-201ENST00000606564 490 ntBASIC14.03□□□□□ -0.16
CFHR3Q02985 AC012313.10-201ENST00000623509 926 ntBASIC14.03□□□□□ -0.16
CFHR3Q02985 AC022898.2-201ENST00000616822 1312 ntBASIC14.03□□□□□ -0.16
CFHR3Q02985 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CFHR3Q02985 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms