Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.75■□□□□ 0.59
EPHB3P54753 AC139887.3-201ENST00000568585 713 ntBASIC18.75■□□□□ 0.59
EPHB3P54753 FAM215A-202ENST00000632077 792 ntBASIC18.75■□□□□ 0.59
EPHB3P54753 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EPHB3P54753 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
EPHB3P54753 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EPHB3P54753 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPHB3P54753 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.75■□□□□ 0.59
EPHB3P54753 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EPHB3P54753 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.74■□□□□ 0.59
EPHB3P54753 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 AC096633.1-201ENST00000422446 749 ntBASIC18.74■□□□□ 0.59
EPHB3P54753 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.74■□□□□ 0.59
EPHB3P54753 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.74■□□□□ 0.59
EPHB3P54753 AC021087.4-201ENST00000563761 564 ntBASIC18.74■□□□□ 0.59
EPHB3P54753 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
EPHB3P54753 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EPHB3P54753 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EPHB3P54753 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHB3P54753 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHB3P54753 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 AC243591.1-201ENST00000452967 1364 ntBASIC18.73■□□□□ 0.59
EPHB3P54753 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 PMS2P1-201ENST00000431037 1228 ntBASIC18.73■□□□□ 0.59
EPHB3P54753 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 HNRNPDP1-201ENST00000439535 754 ntBASIC18.73■□□□□ 0.59
EPHB3P54753 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 DUTP2-201ENST00000519164 463 ntBASIC18.73■□□□□ 0.59
EPHB3P54753 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.73■□□□□ 0.59
EPHB3P54753 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHB3P54753 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.73■□□□□ 0.59
EPHB3P54753 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.73■□□□□ 0.59
EPHB3P54753 AL139288.1-201ENST00000623748 933 ntBASIC18.73■□□□□ 0.59
EPHB3P54753 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHB3P54753 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
EPHB3P54753 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHB3P54753 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EPHB3P54753 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHB3P54753 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
EPHB3P54753 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
EPHB3P54753 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EPHB3P54753 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB3P54753 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
EPHB3P54753 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.72■□□□□ 0.59
EPHB3P54753 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHB3P54753 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHB3P54753 AL049840.3-201ENST00000602669 611 ntBASIC18.72■□□□□ 0.59
EPHB3P54753 MIR7706-201ENST00000613747 67 ntBASIC18.72■□□□□ 0.59
EPHB3P54753 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHB3P54753 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHB3P54753 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms