Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
PMS1P54277 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.8■□□□□ 0.76
PMS1P54277 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 HLA-F-220ENST00000434407 884 ntBASIC19.8■□□□□ 0.76
PMS1P54277 ATP5G1P1-201ENST00000448724 379 ntBASIC19.8■□□□□ 0.76
PMS1P54277 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PMS1P54277 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.8■□□□□ 0.76
PMS1P54277 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.8■□□□□ 0.76
PMS1P54277 AC024563.2-201ENST00000603282 481 ntBASIC19.8■□□□□ 0.76
PMS1P54277 AC005363.2-201ENST00000618631 242 ntBASIC19.8■□□□□ 0.76
PMS1P54277 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.8■□□□□ 0.76
PMS1P54277 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.8■□□□□ 0.76
PMS1P54277 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PMS1P54277 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PMS1P54277 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 AL137013.1-201ENST00000432946 1228 ntBASIC19.79■□□□□ 0.76
PMS1P54277 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 KRT18P38-201ENST00000449496 1282 ntBASIC19.79■□□□□ 0.76
PMS1P54277 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.79■□□□□ 0.76
PMS1P54277 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.79■□□□□ 0.76
PMS1P54277 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.79■□□□□ 0.76
PMS1P54277 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 AC012313.1-201ENST00000593393 3059 ntBASIC19.79■□□□□ 0.76
PMS1P54277 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PMS1P54277 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
PMS1P54277 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 AC106820.2-201ENST00000563775 3264 ntBASIC19.78■□□□□ 0.76
PMS1P54277 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PMS1P54277 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.78■□□□□ 0.76
PMS1P54277 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.78■□□□□ 0.76
PMS1P54277 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.78■□□□□ 0.76
PMS1P54277 KRT18P57-201ENST00000443599 1254 ntBASIC19.78■□□□□ 0.76
PMS1P54277 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.78■□□□□ 0.76
PMS1P54277 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.78■□□□□ 0.76
PMS1P54277 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.78■□□□□ 0.76
PMS1P54277 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 KRT8P47-201ENST00000604727 1398 ntBASIC19.78■□□□□ 0.76
PMS1P54277 AC009949.1-201ENST00000623048 1830 ntBASIC19.78■□□□□ 0.76
PMS1P54277 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.78■□□□□ 0.76
PMS1P54277 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PMS1P54277 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PMS1P54277 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms