Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.07■□□□□ 0.16
GBX2P52951 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
GBX2P52951 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.07■□□□□ 0.16
GBX2P52951 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.07■□□□□ 0.16
GBX2P52951 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.07■□□□□ 0.16
GBX2P52951 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.07■□□□□ 0.16
GBX2P52951 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GBX2P52951 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 PP12613-201ENST00000424958 2230 ntBASIC16.06■□□□□ 0.16
GBX2P52951 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GBX2P52951 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.06■□□□□ 0.16
GBX2P52951 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.06■□□□□ 0.16
GBX2P52951 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.06■□□□□ 0.16
GBX2P52951 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.06■□□□□ 0.16
GBX2P52951 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GBX2P52951 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
GBX2P52951 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 AF186192.3-201ENST00000583427 947 ntBASIC16.06■□□□□ 0.16
GBX2P52951 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GBX2P52951 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GBX2P52951 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 AC036111.1-201ENST00000533973 1582 ntBASIC16.05■□□□□ 0.16
GBX2P52951 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 AC080080.1-201ENST00000625121 2420 ntBASIC16.05■□□□□ 0.16
GBX2P52951 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 MIR935-201ENST00000401179 91 ntBASIC16.05■□□□□ 0.16
GBX2P52951 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 NFIC-211ENST00000641145 8399 ntBASIC16.05■□□□□ 0.16
GBX2P52951 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.05■□□□□ 0.16
GBX2P52951 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
GBX2P52951 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
GBX2P52951 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
GBX2P52951 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GBX2P52951 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.04■□□□□ 0.16
GBX2P52951 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.04■□□□□ 0.16
GBX2P52951 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
GBX2P52951 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GBX2P52951 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.04■□□□□ 0.16
GBX2P52951 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.04■□□□□ 0.16
GBX2P52951 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 AC009065.1-201ENST00000564055 1225 ntBASIC16.04■□□□□ 0.16
GBX2P52951 RARRES2P10-201ENST00000564312 460 ntBASIC16.04■□□□□ 0.16
GBX2P52951 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
GBX2P52951 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.04■□□□□ 0.16
GBX2P52951 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
GBX2P52951 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms