Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLCN3P51790 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.73■□□□□ 0.75
CLCN3P51790 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CLCN3P51790 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLCN3P51790 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLCN3P51790 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLCN3P51790 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CLCN3P51790 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN3P51790 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN3P51790 RBM17P3-201ENST00000417687 1192 ntBASIC19.72■□□□□ 0.75
CLCN3P51790 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN3P51790 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN3P51790 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN3P51790 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.72■□□□□ 0.75
CLCN3P51790 AC104581.1-202ENST00000635932 2618 ntBASIC19.72■□□□□ 0.75
CLCN3P51790 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN3P51790 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN3P51790 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
CLCN3P51790 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 AC010460.3-201ENST00000511359 1579 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 KRT18P67-201ENST00000432816 1264 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN3P51790 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 RNA5SP419-201ENST00000515908 135 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 DUTP2-201ENST00000519164 463 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN3P51790 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN3P51790 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN3P51790 AL773604.1-201ENST00000617417 272 ntBASIC19.71■□□□□ 0.75
CLCN3P51790 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLCN3P51790 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN3P51790 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN3P51790 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN3P51790 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CLCN3P51790 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CLCN3P51790 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLCN3P51790 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 AP005117.1-201ENST00000584346 1413 ntBASIC19.7■□□□□ 0.74
CLCN3P51790 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 AL022342.1-201ENST00000400363 863 ntBASIC19.7■□□□□ 0.74
CLCN3P51790 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 ABCD1P5-201ENST00000445663 754 ntBASIC19.7■□□□□ 0.74
CLCN3P51790 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN3P51790 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCN3P51790 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms