Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.64■□□□□ 0.73
CASP4P49662 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.64■□□□□ 0.73
CASP4P49662 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CASP4P49662 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.63■□□□□ 0.73
CASP4P49662 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 AC005332.1-201ENST00000577698 1310 ntBASIC19.63■□□□□ 0.73
CASP4P49662 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.63■□□□□ 0.73
CASP4P49662 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.63■□□□□ 0.73
CASP4P49662 FAM86EP-206ENST00000510506 987 ntBASIC19.63■□□□□ 0.73
CASP4P49662 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
CASP4P49662 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.63■□□□□ 0.73
CASP4P49662 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.63■□□□□ 0.73
CASP4P49662 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CASP4P49662 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CASP4P49662 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.62■□□□□ 0.73
CASP4P49662 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CASP4P49662 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 KRT18P65-201ENST00000439811 1286 ntBASIC19.62■□□□□ 0.73
CASP4P49662 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.62■□□□□ 0.73
CASP4P49662 AL136038.3-201ENST00000561909 1096 ntBASIC19.62■□□□□ 0.73
CASP4P49662 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CASP4P49662 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.62■□□□□ 0.73
CASP4P49662 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.62■□□□□ 0.73
CASP4P49662 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CASP4P49662 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CASP4P49662 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 KRT8P47-201ENST00000604727 1398 ntBASIC19.61■□□□□ 0.73
CASP4P49662 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP4P49662 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.61■□□□□ 0.73
CASP4P49662 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.61■□□□□ 0.73
CASP4P49662 AL121956.5-201ENST00000625261 221 ntBASIC19.61■□□□□ 0.73
CASP4P49662 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CASP4P49662 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.61■□□□□ 0.73
CASP4P49662 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CASP4P49662 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CASP4P49662 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CASP4P49662 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms