Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.62■□□□□ 0.57
PTPN7P35236 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
PTPN7P35236 AC024563.2-201ENST00000603282 481 ntBASIC18.62■□□□□ 0.57
PTPN7P35236 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 LINC00304-203ENST00000565008 1864 ntBASIC18.62■□□□□ 0.57
PTPN7P35236 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN7P35236 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
PTPN7P35236 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN7P35236 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN7P35236 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.61■□□□□ 0.57
PTPN7P35236 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN7P35236 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 AC139713.2-201ENST00000641328 2723 ntBASIC18.61■□□□□ 0.57
PTPN7P35236 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN7P35236 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PTPN7P35236 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTPN7P35236 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN7P35236 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.6■□□□□ 0.57
PTPN7P35236 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 AC087499.1-201ENST00000418141 1075 ntBASIC18.6■□□□□ 0.57
PTPN7P35236 SLC25A3P1-201ENST00000443844 931 ntBASIC18.6■□□□□ 0.57
PTPN7P35236 RASA4DP-201ENST00000460726 1199 ntBASIC18.6■□□□□ 0.57
PTPN7P35236 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 AC116407.2-201ENST00000613639 860 ntBASIC18.6■□□□□ 0.57
PTPN7P35236 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PTPN7P35236 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN7P35236 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN7P35236 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN7P35236 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PTPN7P35236 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 DDX43P3-201ENST00000441064 443 ntBASIC18.59■□□□□ 0.57
PTPN7P35236 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN7P35236 AC093827.2-201ENST00000512654 315 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms