Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HTR1EP28566 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 AC116562.4-202ENST00000641738 218 ntBASIC17.27■□□□□ 0.36
HTR1EP28566 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1EP28566 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1EP28566 KRT8P50-201ENST00000562022 1438 ntBASIC17.27■□□□□ 0.35
HTR1EP28566 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1EP28566 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1EP28566 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.27■□□□□ 0.35
HTR1EP28566 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
HTR1EP28566 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.27■□□□□ 0.35
HTR1EP28566 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.27■□□□□ 0.35
HTR1EP28566 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1EP28566 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HTR1EP28566 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HTR1EP28566 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1EP28566 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HTR1EP28566 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
HTR1EP28566 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.26■□□□□ 0.35
HTR1EP28566 TSPY5P-201ENST00000426936 936 ntBASIC17.26■□□□□ 0.35
HTR1EP28566 FAM207BP-201ENST00000447172 505 ntBASIC17.26■□□□□ 0.35
HTR1EP28566 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1EP28566 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.26■□□□□ 0.35
HTR1EP28566 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1EP28566 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1EP28566 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1EP28566 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.25■□□□□ 0.35
HTR1EP28566 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.25■□□□□ 0.35
HTR1EP28566 YBX1P2-201ENST00000489612 999 ntBASIC17.25■□□□□ 0.35
HTR1EP28566 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HTR1EP28566 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.25■□□□□ 0.35
HTR1EP28566 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 AL023806.1-201ENST00000603994 1649 ntBASIC17.25■□□□□ 0.35
HTR1EP28566 AC034236.2-201ENST00000606662 1610 ntBASIC17.25■□□□□ 0.35
HTR1EP28566 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HTR1EP28566 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HTR1EP28566 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 CCR12P-201ENST00000446203 998 ntBASIC17.24■□□□□ 0.35
HTR1EP28566 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.24■□□□□ 0.35
HTR1EP28566 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1EP28566 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
HTR1EP28566 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.24■□□□□ 0.35
HTR1EP28566 AL138966.2-201ENST00000621997 464 ntBASIC17.24■□□□□ 0.35
HTR1EP28566 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.24■□□□□ 0.35
HTR1EP28566 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HTR1EP28566 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HTR1EP28566 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HTR1EP28566 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HTR1EP28566 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1EP28566 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.23■□□□□ 0.35
HTR1EP28566 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.23■□□□□ 0.35
HTR1EP28566 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HTR1EP28566 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HTR1EP28566 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms