Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 AL035685.1-201ENST00000636663 812 ntBASIC14.01□□□□□ -0.17
RAB5AP20339 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
RAB5AP20339 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.01□□□□□ -0.17
RAB5AP20339 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5AP20339 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5AP20339 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5AP20339 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5AP20339 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5AP20339 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 AL355312.1-201ENST00000407115 2176 ntBASIC14□□□□□ -0.17
RAB5AP20339 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14□□□□□ -0.17
RAB5AP20339 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14□□□□□ -0.17
RAB5AP20339 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AC010141.2-201ENST00000452426 721 ntBASIC14□□□□□ -0.17
RAB5AP20339 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14□□□□□ -0.17
RAB5AP20339 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14□□□□□ -0.17
RAB5AP20339 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
RAB5AP20339 AL136162.1-201ENST00000607711 1078 ntBASIC14□□□□□ -0.17
RAB5AP20339 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB5AP20339 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AC092384.3-202ENST00000564646 2873 ntBASIC14□□□□□ -0.17
RAB5AP20339 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14□□□□□ -0.17
RAB5AP20339 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5AP20339 AC018553.1-201ENST00000616682 1458 ntBASIC13.99□□□□□ -0.17
RAB5AP20339 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 AC135279.3-201ENST00000610945 1311 ntBASIC13.99□□□□□ -0.17
RAB5AP20339 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 AC092068.3-201ENST00000587894 2016 ntBASIC13.99□□□□□ -0.17
RAB5AP20339 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.99□□□□□ -0.17
RAB5AP20339 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 AC024257.2-201ENST00000549699 147 ntBASIC13.99□□□□□ -0.17
RAB5AP20339 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 AL355001.2-201ENST00000620617 1191 ntBASIC13.99□□□□□ -0.17
RAB5AP20339 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.99□□□□□ -0.17
RAB5AP20339 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAB5AP20339 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5AP20339 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 AC144831.1-201ENST00000573312 2656 ntBASIC13.98□□□□□ -0.17
RAB5AP20339 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAB5AP20339 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RAB5AP20339 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms