Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.83■□□□□ 0.13
ATF1P18846 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF1P18846 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF1P18846 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF1P18846 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF1P18846 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ATF1P18846 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.83■□□□□ 0.12
ATF1P18846 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.83■□□□□ 0.12
ATF1P18846 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 AC098590.1-201ENST00000468126 897 ntBASIC15.83■□□□□ 0.12
ATF1P18846 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 AC233702.5-201ENST00000584107 538 ntBASIC15.83■□□□□ 0.12
ATF1P18846 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
ATF1P18846 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.83■□□□□ 0.12
ATF1P18846 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.83■□□□□ 0.12
ATF1P18846 AL049637.2-201ENST00000641778 930 ntBASIC15.83■□□□□ 0.12
ATF1P18846 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.83■□□□□ 0.12
ATF1P18846 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 AL355312.1-201ENST00000407115 2176 ntBASIC15.83■□□□□ 0.12
ATF1P18846 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.83■□□□□ 0.12
ATF1P18846 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ATF1P18846 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ATF1P18846 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
ATF1P18846 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 GCSHP5-201ENST00000443090 522 ntBASIC15.82■□□□□ 0.12
ATF1P18846 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.82■□□□□ 0.12
ATF1P18846 MIR4674-201ENST00000582457 87 ntBASIC15.82■□□□□ 0.12
ATF1P18846 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
ATF1P18846 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
ATF1P18846 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 AL121761.2-201ENST00000598007 1648 ntBASIC15.82■□□□□ 0.12
ATF1P18846 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ATF1P18846 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.82■□□□□ 0.12
ATF1P18846 AL118508.1-201ENST00000613502 2345 ntBASIC15.82■□□□□ 0.12
ATF1P18846 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF1P18846 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ATF1P18846 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF1P18846 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 AC093010.1-201ENST00000473625 1624 ntBASIC15.81■□□□□ 0.12
ATF1P18846 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF1P18846 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF1P18846 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.81■□□□□ 0.12
ATF1P18846 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.81■□□□□ 0.12
ATF1P18846 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ATF1P18846 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.81■□□□□ 0.12
ATF1P18846 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms