Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.12■□□□□ 0.49
SRFP11831 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SRFP11831 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.12■□□□□ 0.49
SRFP11831 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.12■□□□□ 0.49
SRFP11831 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.12■□□□□ 0.49
SRFP11831 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.12■□□□□ 0.49
SRFP11831 PDPK2P-202ENST00000562415 1191 ntBASIC18.12■□□□□ 0.49
SRFP11831 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC18.12■□□□□ 0.49
SRFP11831 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SRFP11831 AL353593.2-201ENST00000602529 1483 ntBASIC18.12■□□□□ 0.49
SRFP11831 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.12■□□□□ 0.49
SRFP11831 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SRFP11831 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SRFP11831 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 AL035633.1-201ENST00000406139 838 ntBASIC18.11■□□□□ 0.49
SRFP11831 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.11■□□□□ 0.49
SRFP11831 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.11■□□□□ 0.49
SRFP11831 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SRFP11831 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.11■□□□□ 0.49
SRFP11831 SPCS2P1-201ENST00000561636 679 ntBASIC18.11■□□□□ 0.49
SRFP11831 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.11■□□□□ 0.49
SRFP11831 AL031432.2-201ENST00000566714 459 ntBASIC18.11■□□□□ 0.49
SRFP11831 AL928711.1-201ENST00000570165 459 ntBASIC18.11■□□□□ 0.49
SRFP11831 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.11■□□□□ 0.49
SRFP11831 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.11■□□□□ 0.49
SRFP11831 AC010654.1-201ENST00000615722 808 ntBASIC18.11■□□□□ 0.49
SRFP11831 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SRFP11831 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.1■□□□□ 0.49
SRFP11831 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SRFP11831 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
SRFP11831 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SRFP11831 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SRFP11831 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SRFP11831 IGLL3P-201ENST00000412472 434 ntBASIC18.1■□□□□ 0.49
SRFP11831 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.1■□□□□ 0.49
SRFP11831 TSEN15P1-201ENST00000423257 515 ntBASIC18.1■□□□□ 0.49
SRFP11831 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SRFP11831 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.1■□□□□ 0.49
SRFP11831 ACTG1P14-201ENST00000446382 1122 ntBASIC18.1■□□□□ 0.49
SRFP11831 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 AP000344.2-201ENST00000512987 629 ntBASIC18.1■□□□□ 0.49
SRFP11831 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.1■□□□□ 0.49
SRFP11831 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SRFP11831 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.09■□□□□ 0.49
SRFP11831 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SRFP11831 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SRFP11831 MRPL20P1-201ENST00000400819 433 ntBASIC18.09■□□□□ 0.49
SRFP11831 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms