Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
RARAP10276 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RARAP10276 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.9■□□□□ 0.62
RARAP10276 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.9■□□□□ 0.62
RARAP10276 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 AC011558.1-201ENST00000623459 338 ntBASIC18.9■□□□□ 0.62
RARAP10276 AL031432.5-201ENST00000641059 760 ntBASIC18.9■□□□□ 0.62
RARAP10276 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RARAP10276 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RARAP10276 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RARAP10276 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.9■□□□□ 0.62
RARAP10276 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
RARAP10276 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RARAP10276 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RARAP10276 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RARAP10276 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 BX664615.1-201ENST00000443558 458 ntBASIC18.89■□□□□ 0.61
RARAP10276 RASA4DP-201ENST00000460726 1199 ntBASIC18.89■□□□□ 0.61
RARAP10276 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.89■□□□□ 0.61
RARAP10276 AC034232.1-201ENST00000506026 1064 ntBASIC18.89■□□□□ 0.61
RARAP10276 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RARAP10276 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RARAP10276 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 AC132938.6-201ENST00000623828 1655 ntBASIC18.89■□□□□ 0.61
RARAP10276 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RARAP10276 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
RARAP10276 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RARAP10276 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 AC108860.2-201ENST00000562760 2183 ntBASIC18.88■□□□□ 0.61
RARAP10276 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.88■□□□□ 0.61
RARAP10276 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RARAP10276 AC117947.1-201ENST00000427448 529 ntBASIC18.88■□□□□ 0.61
RARAP10276 YBX1P2-201ENST00000489612 999 ntBASIC18.88■□□□□ 0.61
RARAP10276 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 AC079602.3-201ENST00000623931 403 ntBASIC18.88■□□□□ 0.61
RARAP10276 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RARAP10276 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.87■□□□□ 0.61
RARAP10276 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RARAP10276 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 KRT18P57-201ENST00000443599 1254 ntBASIC18.87■□□□□ 0.61
RARAP10276 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RARAP10276 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.87■□□□□ 0.61
RARAP10276 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.87■□□□□ 0.61
RARAP10276 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.87■□□□□ 0.61
RARAP10276 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.87■□□□□ 0.61
RARAP10276 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms