Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC175P0C221 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC175P0C221 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC175P0C221 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC175P0C221 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC175P0C221 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC175P0C221 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC175P0C221 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC175P0C221 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC175P0C221 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.46■□□□□ 0.71
CCDC175P0C221 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC175P0C221 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC175P0C221 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC175P0C221 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC175P0C221 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC175P0C221 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC175P0C221 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC175P0C221 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 AP000692.2-201ENST00000608391 879 ntBASIC19.45■□□□□ 0.7
CCDC175P0C221 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC175P0C221 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC175P0C221 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC175P0C221 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC175P0C221 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC175P0C221 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC175P0C221 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC175P0C221 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC175P0C221 DUTP2-201ENST00000519164 463 ntBASIC19.44■□□□□ 0.7
CCDC175P0C221 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC175P0C221 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC175P0C221 AC104771.1-201ENST00000603335 964 ntBASIC19.44■□□□□ 0.7
CCDC175P0C221 AC092666.2-201ENST00000613287 246 ntBASIC19.44■□□□□ 0.7
CCDC175P0C221 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC175P0C221 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC175P0C221 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC175P0C221 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC175P0C221 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 HOXB1-202ENST00000577092 1414 ntBASIC19.43■□□□□ 0.7
CCDC175P0C221 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CCDC175P0C221 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC175P0C221 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC175P0C221 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC175P0C221 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC175P0C221 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC175P0C221 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC175P0C221 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC175P0C221 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC175P0C221 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms