Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 AC011506.1-201ENST00000474329 610 ntBASIC13.73□□□□□ -0.21
TCRAP04437 FDX2-207ENST00000494368 584 ntTSL 4 BASIC13.73□□□□□ -0.21
TCRAP04437 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC13.73□□□□□ -0.21
TCRAP04437 MIR6786-201ENST00000616843 113 ntBASIC13.73□□□□□ -0.21
TCRAP04437 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 AC036111.1-201ENST00000533973 1582 ntBASIC13.73□□□□□ -0.21
TCRAP04437 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TCRAP04437 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TCRAP04437 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TCRAP04437 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TCRAP04437 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 CROCCP2-202ENST00000412962 2773 ntBASIC13.72□□□□□ -0.21
TCRAP04437 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 LINC01126-201ENST00000623515 1646 ntBASIC13.72□□□□□ -0.21
TCRAP04437 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.72□□□□□ -0.21
TCRAP04437 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 B3GAT3P1-201ENST00000471720 806 ntBASIC13.72□□□□□ -0.21
TCRAP04437 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.72□□□□□ -0.21
TCRAP04437 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TCRAP04437 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
TCRAP04437 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TCRAP04437 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TCRAP04437 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.71□□□□□ -0.21
TCRAP04437 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TCRAP04437 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC13.71□□□□□ -0.21
TCRAP04437 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 RNA5SP413-201ENST00000516373 109 ntBASIC13.71□□□□□ -0.21
TCRAP04437 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.71□□□□□ -0.21
TCRAP04437 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
TCRAP04437 AC104771.1-201ENST00000603335 964 ntBASIC13.71□□□□□ -0.21
TCRAP04437 AP000692.2-201ENST00000608391 879 ntBASIC13.71□□□□□ -0.21
TCRAP04437 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TCRAP04437 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TCRAP04437 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.71□□□□□ -0.21
TCRAP04437 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TCRAP04437 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TCRAP04437 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms