Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.68■□□□□ 0.74
VTNP04004 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
VTNP04004 AC093677.2-201ENST00000600169 1863 ntBASIC19.68■□□□□ 0.74
VTNP04004 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VTNP04004 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.68■□□□□ 0.74
VTNP04004 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VTNP04004 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
VTNP04004 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
VTNP04004 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VTNP04004 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.67■□□□□ 0.74
VTNP04004 AC018712.1-201ENST00000455767 687 ntBASIC19.67■□□□□ 0.74
VTNP04004 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
VTNP04004 RNPS1P1-201ENST00000507437 918 ntBASIC19.67■□□□□ 0.74
VTNP04004 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.67■□□□□ 0.74
VTNP04004 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.67■□□□□ 0.74
VTNP04004 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.67■□□□□ 0.74
VTNP04004 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.67■□□□□ 0.74
VTNP04004 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
VTNP04004 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VTNP04004 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
VTNP04004 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VTNP04004 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.67■□□□□ 0.74
VTNP04004 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 AC010460.3-201ENST00000511359 1579 ntBASIC19.66■□□□□ 0.74
VTNP04004 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VTNP04004 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
VTNP04004 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 SART3-203ENST00000546611 1184 ntBASIC19.66■□□□□ 0.74
VTNP04004 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 AL049840.3-201ENST00000602669 611 ntBASIC19.66■□□□□ 0.74
VTNP04004 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
VTNP04004 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.66■□□□□ 0.74
VTNP04004 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.66■□□□□ 0.74
VTNP04004 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.66■□□□□ 0.74
VTNP04004 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.66■□□□□ 0.74
VTNP04004 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VTNP04004 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.65■□□□□ 0.74
VTNP04004 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.65■□□□□ 0.74
VTNP04004 FAM220CP-201ENST00000395253 831 ntBASIC19.65■□□□□ 0.74
VTNP04004 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.65■□□□□ 0.74
VTNP04004 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VTNP04004 HNRNPDP1-201ENST00000439535 754 ntBASIC19.65■□□□□ 0.74
VTNP04004 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.65■□□□□ 0.74
VTNP04004 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.65■□□□□ 0.74
VTNP04004 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.65■□□□□ 0.74
VTNP04004 AC073648.2-201ENST00000510116 352 ntBASIC19.65■□□□□ 0.74
VTNP04004 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.65■□□□□ 0.74
VTNP04004 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.65■□□□□ 0.74
VTNP04004 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.65■□□□□ 0.74
VTNP04004 BX640515.1-201ENST00000617215 977 ntBASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms