Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 DOC2GP-204ENST00000639052 2548 ntBASIC14.28□□□□□ -0.12
IFNA1P01562 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
IFNA1P01562 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.28□□□□□ -0.12
IFNA1P01562 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
IFNA1P01562 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.27□□□□□ -0.12
IFNA1P01562 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
IFNA1P01562 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
IFNA1P01562 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
IFNA1P01562 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 PHGDH-209ENST00000641074 1780 ntBASIC14.27□□□□□ -0.12
IFNA1P01562 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
IFNA1P01562 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 KRT17P1-201ENST00000399211 1546 ntBASIC14.27□□□□□ -0.12
IFNA1P01562 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
IFNA1P01562 AC010980.2-201ENST00000587099 1412 ntBASIC14.27□□□□□ -0.12
IFNA1P01562 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.27□□□□□ -0.12
IFNA1P01562 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.27□□□□□ -0.12
IFNA1P01562 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
IFNA1P01562 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IFNA1P01562 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 LSM12P1-201ENST00000411836 588 ntBASIC14.27□□□□□ -0.13
IFNA1P01562 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.27□□□□□ -0.13
IFNA1P01562 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 BID-214ENST00000617586 542 ntTSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 AC110285.6-201ENST00000617652 491 ntBASIC14.27□□□□□ -0.13
IFNA1P01562 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.27□□□□□ -0.13
IFNA1P01562 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
IFNA1P01562 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 UBALD1-205ENST00000590891 2641 ntBASIC14.27□□□□□ -0.13
IFNA1P01562 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
IFNA1P01562 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.26□□□□□ -0.13
IFNA1P01562 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.26□□□□□ -0.13
IFNA1P01562 CYP2T1P-201ENST00000432607 1285 ntBASIC14.26□□□□□ -0.13
IFNA1P01562 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.26□□□□□ -0.13
IFNA1P01562 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IFNA1P01562 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
IFNA1P01562 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms