Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16■□□□□ 0.15
CNOT4O95628 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16■□□□□ 0.15
CNOT4O95628 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16■□□□□ 0.15
CNOT4O95628 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16■□□□□ 0.15
CNOT4O95628 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16■□□□□ 0.15
CNOT4O95628 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16■□□□□ 0.15
CNOT4O95628 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16■□□□□ 0.15
CNOT4O95628 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16■□□□□ 0.15
CNOT4O95628 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16■□□□□ 0.15
CNOT4O95628 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16■□□□□ 0.15
CNOT4O95628 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 AC092329.2-201ENST00000598402 547 ntBASIC16■□□□□ 0.15
CNOT4O95628 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16■□□□□ 0.15
CNOT4O95628 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CNOT4O95628 AL138781.2-201ENST00000617896 1843 ntBASIC16■□□□□ 0.15
CNOT4O95628 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16■□□□□ 0.15
CNOT4O95628 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CNOT4O95628 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
CNOT4O95628 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT4O95628 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 AC246785.2-201ENST00000432512 513 ntBASIC15.99■□□□□ 0.15
CNOT4O95628 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.99■□□□□ 0.15
CNOT4O95628 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 RN7SL510P-201ENST00000581311 263 ntBASIC15.99■□□□□ 0.15
CNOT4O95628 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CNOT4O95628 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.99■□□□□ 0.15
CNOT4O95628 IGHV3-41-201ENST00000613121 348 ntBASIC15.99■□□□□ 0.15
CNOT4O95628 AC004263.2-201ENST00000617183 678 ntBASIC15.99■□□□□ 0.15
CNOT4O95628 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CNOT4O95628 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CNOT4O95628 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CNOT4O95628 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT4O95628 AP002383.4-201ENST00000442518 975 ntBASIC15.98■□□□□ 0.15
CNOT4O95628 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.98■□□□□ 0.15
CNOT4O95628 RN7SL606P-201ENST00000472779 293 ntBASIC15.98■□□□□ 0.15
CNOT4O95628 VENTXP7-201ENST00000475503 772 ntBASIC15.98■□□□□ 0.15
CNOT4O95628 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.98■□□□□ 0.15
CNOT4O95628 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CNOT4O95628 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT4O95628 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CNOT4O95628 AC009154.2-201ENST00000621177 724 ntBASIC15.98■□□□□ 0.15
CNOT4O95628 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CNOT4O95628 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.98■□□□□ 0.15
CNOT4O95628 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 AC126763.1-201ENST00000552015 2118 ntBASIC15.98■□□□□ 0.15
CNOT4O95628 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.98■□□□□ 0.15
CNOT4O95628 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CNOT4O95628 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CNOT4O95628 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CNOT4O95628 LINC01126-201ENST00000623515 1646 ntBASIC15.97■□□□□ 0.15
CNOT4O95628 KRT18P1-202ENST00000452408 1331 ntBASIC15.97■□□□□ 0.15
CNOT4O95628 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CNOT4O95628 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms