Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX2-2O95096 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX2-2O95096 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX2-2O95096 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX2-2O95096 AL121956.5-201ENST00000625261 221 ntBASIC16.62■□□□□ 0.25
NKX2-2O95096 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX2-2O95096 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
NKX2-2O95096 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
NKX2-2O95096 KRT8P47-201ENST00000604727 1398 ntBASIC16.62■□□□□ 0.25
NKX2-2O95096 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX2-2O95096 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NKX2-2O95096 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC068472.1-201ENST00000474589 881 ntBASIC16.61■□□□□ 0.25
NKX2-2O95096 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC112698.1-201ENST00000510299 916 ntBASIC16.61■□□□□ 0.25
NKX2-2O95096 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX2-2O95096 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.61■□□□□ 0.25
NKX2-2O95096 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 AC116407.2-201ENST00000613639 860 ntBASIC16.61■□□□□ 0.25
NKX2-2O95096 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.61■□□□□ 0.25
NKX2-2O95096 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX2-2O95096 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX2-2O95096 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX2-2O95096 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.6■□□□□ 0.25
NKX2-2O95096 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX2-2O95096 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX2-2O95096 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 AL590326.2-201ENST00000625139 305 ntBASIC16.6■□□□□ 0.25
NKX2-2O95096 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX2-2O95096 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
NKX2-2O95096 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NKX2-2O95096 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX2-2O95096 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX2-2O95096 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX2-2O95096 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms