Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 AC008556.1-201ENST00000610908 2040 ntBASIC16.11■□□□□ 0.17
PFDN1O60925 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PFDN1O60925 FEM1AP3-201ENST00000403722 1741 ntBASIC16.11■□□□□ 0.17
PFDN1O60925 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.11■□□□□ 0.17
PFDN1O60925 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PFDN1O60925 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.1■□□□□ 0.17
PFDN1O60925 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PFDN1O60925 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 AC093010.1-201ENST00000473625 1624 ntBASIC16.1■□□□□ 0.17
PFDN1O60925 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PFDN1O60925 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.1■□□□□ 0.17
PFDN1O60925 MIR4508-201ENST00000584178 70 ntBASIC16.1■□□□□ 0.17
PFDN1O60925 RARRES2P11-201ENST00000635158 484 ntBASIC16.1■□□□□ 0.17
PFDN1O60925 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.1■□□□□ 0.17
PFDN1O60925 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 AC126177.1-201ENST00000547829 2218 ntBASIC16.1■□□□□ 0.17
PFDN1O60925 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PFDN1O60925 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PFDN1O60925 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.1■□□□□ 0.17
PFDN1O60925 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PFDN1O60925 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 OR2I1P-210ENST00000642037 4691 ntBASIC16.09■□□□□ 0.17
PFDN1O60925 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.09■□□□□ 0.17
PFDN1O60925 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 KRT8P17-201ENST00000453110 1448 ntBASIC16.09■□□□□ 0.17
PFDN1O60925 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.09■□□□□ 0.17
PFDN1O60925 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PFDN1O60925 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.09■□□□□ 0.17
PFDN1O60925 FAM45BP-202ENST00000592932 1624 ntBASIC16.08■□□□□ 0.17
PFDN1O60925 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.08■□□□□ 0.17
PFDN1O60925 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
PFDN1O60925 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PFDN1O60925 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PFDN1O60925 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms