Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
OPHN1O60890 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
OPHN1O60890 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
OPHN1O60890 AC009102.3-201ENST00000623118 1491 ntBASIC18.8■□□□□ 0.6
OPHN1O60890 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.8■□□□□ 0.6
OPHN1O60890 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 MIR3652-201ENST00000579335 131 ntBASIC18.8■□□□□ 0.6
OPHN1O60890 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.8■□□□□ 0.6
OPHN1O60890 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
OPHN1O60890 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
OPHN1O60890 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
OPHN1O60890 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
OPHN1O60890 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
OPHN1O60890 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.79■□□□□ 0.6
OPHN1O60890 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.79■□□□□ 0.6
OPHN1O60890 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 SDHAP2-201ENST00000455183 2001 ntBASIC18.79■□□□□ 0.6
OPHN1O60890 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.79■□□□□ 0.6
OPHN1O60890 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.79■□□□□ 0.6
OPHN1O60890 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
OPHN1O60890 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.78■□□□□ 0.6
OPHN1O60890 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 NOC2LP2-201ENST00000407594 1944 ntBASIC18.78■□□□□ 0.6
OPHN1O60890 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
OPHN1O60890 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.78■□□□□ 0.6
OPHN1O60890 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.78■□□□□ 0.6
OPHN1O60890 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.78■□□□□ 0.6
OPHN1O60890 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.78■□□□□ 0.6
OPHN1O60890 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.78■□□□□ 0.6
OPHN1O60890 AC009065.1-201ENST00000564055 1225 ntBASIC18.78■□□□□ 0.6
OPHN1O60890 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.78■□□□□ 0.6
OPHN1O60890 MIR3180-4-201ENST00000582223 153 ntBASIC18.78■□□□□ 0.6
OPHN1O60890 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.78■□□□□ 0.6
OPHN1O60890 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 AC092119.3-201ENST00000612618 583 ntBASIC18.78■□□□□ 0.6
OPHN1O60890 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
OPHN1O60890 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
OPHN1O60890 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
OPHN1O60890 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.77■□□□□ 0.6
OPHN1O60890 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
OPHN1O60890 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
OPHN1O60890 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
OPHN1O60890 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms