Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 AC092658.1-201ENST00000505836 891 ntBASIC17.37■□□□□ 0.37
GFRA3O60609 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
GFRA3O60609 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 AC068587.9-201ENST00000641814 219 ntBASIC17.37■□□□□ 0.37
GFRA3O60609 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.37■□□□□ 0.37
GFRA3O60609 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.37■□□□□ 0.37
GFRA3O60609 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.37■□□□□ 0.37
GFRA3O60609 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
GFRA3O60609 AC009102.3-201ENST00000623118 1491 ntBASIC17.37■□□□□ 0.37
GFRA3O60609 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GFRA3O60609 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA3O60609 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 AC006116.8-202ENST00000587620 1550 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.36■□□□□ 0.37
GFRA3O60609 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 AL020989.1-201ENST00000422979 469 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.36■□□□□ 0.37
GFRA3O60609 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA3O60609 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA3O60609 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 AC009118.2-201ENST00000613275 655 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.36■□□□□ 0.37
GFRA3O60609 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA3O60609 AC068587.10-201ENST00000641210 219 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
GFRA3O60609 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA3O60609 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA3O60609 AL133338.1-201ENST00000565695 1517 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.36■□□□□ 0.37
GFRA3O60609 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GFRA3O60609 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GFRA3O60609 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.36■□□□□ 0.37
GFRA3O60609 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.36■□□□□ 0.37
GFRA3O60609 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GFRA3O60609 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 MIR1909-201ENST00000411312 80 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 SPDYE11-202ENST00000450699 704 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.35■□□□□ 0.37
GFRA3O60609 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.35■□□□□ 0.37
GFRA3O60609 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.35■□□□□ 0.37
GFRA3O60609 SPDYE9P-201ENST00000570642 692 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 OR7E47P-204ENST00000575924 449 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.35■□□□□ 0.37
GFRA3O60609 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.35■□□□□ 0.37
GFRA3O60609 AL158211.3-201ENST00000607385 239 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 AC004233.3-201ENST00000607794 1269 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 SPDYE10P-202ENST00000612005 668 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 SPDYE8P-202ENST00000612377 668 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 GGTLC5P-201ENST00000617623 998 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GFRA3O60609 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GFRA3O60609 TEX21P-204ENST00000641479 1693 ntBASIC17.35■□□□□ 0.37
GFRA3O60609 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
GFRA3O60609 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GFRA3O60609 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GFRA3O60609 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GFRA3O60609 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
GFRA3O60609 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.34■□□□□ 0.37
GFRA3O60609 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms