Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 HEIH-201ENST00000623091 1652 ntBASIC17.84■□□□□ 0.45
PCDHGA12O60330 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 AC018470.1-201ENST00000624790 3129 ntBASIC17.84■□□□□ 0.45
PCDHGA12O60330 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 AC132008.2-207ENST00000454517 770 ntBASIC17.84■□□□□ 0.45
PCDHGA12O60330 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 AC008608.2-201ENST00000606089 416 ntBASIC17.84■□□□□ 0.45
PCDHGA12O60330 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHGA12O60330 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHGA12O60330 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PCDHGA12O60330 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 AC018712.1-201ENST00000455767 687 ntBASIC17.83■□□□□ 0.44
PCDHGA12O60330 AC106730.1-201ENST00000566722 1090 ntBASIC17.83■□□□□ 0.44
PCDHGA12O60330 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 AC148477.8-201ENST00000624298 468 ntBASIC17.83■□□□□ 0.44
PCDHGA12O60330 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA12O60330 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA12O60330 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 RBM17P3-201ENST00000417687 1192 ntBASIC17.82■□□□□ 0.44
PCDHGA12O60330 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 AL355877.3-201ENST00000622820 899 ntBASIC17.82■□□□□ 0.44
PCDHGA12O60330 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA12O60330 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA12O60330 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms