Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MTDHP4-201ENST00000600287 670 ntBASIC16.99■□□□□ 0.31
URB1O60287 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 LAGE3P1-201ENST00000425356 484 ntBASIC16.99■□□□□ 0.31
URB1O60287 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.99■□□□□ 0.31
URB1O60287 MIR1199-201ENST00000621445 119 ntBASIC16.99■□□□□ 0.31
URB1O60287 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
URB1O60287 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
URB1O60287 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
URB1O60287 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.98■□□□□ 0.31
URB1O60287 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
URB1O60287 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.98■□□□□ 0.31
URB1O60287 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.98■□□□□ 0.31
URB1O60287 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
URB1O60287 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.98■□□□□ 0.31
URB1O60287 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
URB1O60287 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.98■□□□□ 0.31
URB1O60287 YBX1P5-201ENST00000509441 847 ntBASIC16.98■□□□□ 0.31
URB1O60287 AP002472.1-201ENST00000577490 586 ntBASIC16.98■□□□□ 0.31
URB1O60287 MIR4469-201ENST00000583919 79 ntBASIC16.98■□□□□ 0.31
URB1O60287 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.98■□□□□ 0.31
URB1O60287 AC093512.1-201ENST00000617969 520 ntBASIC16.98■□□□□ 0.31
URB1O60287 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.98■□□□□ 0.31
URB1O60287 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
URB1O60287 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
URB1O60287 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.97■□□□□ 0.31
URB1O60287 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
URB1O60287 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 AC092865.6-201ENST00000642101 219 ntBASIC16.97■□□□□ 0.31
URB1O60287 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 KRT8P50-201ENST00000562022 1438 ntBASIC16.97■□□□□ 0.31
URB1O60287 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
URB1O60287 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.97■□□□□ 0.31
URB1O60287 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
URB1O60287 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms